HCSGD entry for SDF2L1
1. General information
| Official gene symbol | SDF2L1 |
|---|---|
| Entrez ID | 23753 |
| Gene full name | stromal cell-derived factor 2-like 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005788 | Endoplasmic reticulum lumen | IEA | cellular_component |
| GO:0016020 | Membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2270581133 | 0.0968338665 | 0.9085002280 | 0.5928737381 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.8161879538 |
| GSE13712_SHEAR | Down | -0.3641755953 |
| GSE13712_STATIC | Up | 0.0206889722 |
| GSE19018 | Down | -0.2075812491 |
| GSE19899_A1 | Down | -0.5466370637 |
| GSE19899_A2 | Up | 0.0078070335 |
| PubMed_21979375_A1 | Up | 0.2251658855 |
| PubMed_21979375_A2 | Down | -0.3777580138 |
| GSE35957 | Down | -0.0734106441 |
| GSE36640 | Down | -0.0892490064 |
| GSE54402 | Up | 0.5388434162 |
| GSE9593 | Down | -0.6163058474 |
| GSE43922 | Up | 0.2925267117 |
| GSE24585 | Down | -0.2460265727 |
| GSE37065 | Down | -0.1161124068 |
| GSE28863_A1 | Down | -0.3330976767 |
| GSE28863_A2 | Down | -0.1652578978 |
| GSE28863_A3 | Up | 0.0558731897 |
| GSE28863_A4 | Down | -0.0268315257 |
| GSE48662 | Up | 0.6635946068 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018061 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022774 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047950 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
