HCSGD entry for GABARAPL1
1. General information
| Official gene symbol | GABARAPL1 |
|---|---|
| Entrez ID | 23710 |
| Gene full name | GABA(A) receptor-associated protein like 1 |
| Other gene symbols | APG8-LIKE APG8L ATG8 ATG8B ATG8L GEC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005622 | Intracellular | IDA | cellular_component |
| GO:0005776 | Autophagic vacuole | IDA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IEA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005874 | Microtubule | IEA | cellular_component |
| GO:0006914 | Autophagy | IEA | biological_process |
| GO:0030659 | Cytoplasmic vesicle membrane | IEA | cellular_component |
| GO:0048487 | Beta-tubulin binding | ISS | molecular_function |
| GO:0050811 | GABA receptor binding | ISS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0422512215 | 0.0226025835 | 0.4592359620 | 0.2896409932 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0045860718 |
| GSE13712_SHEAR | Up | 0.2114929055 |
| GSE13712_STATIC | Up | 0.0498576324 |
| GSE19018 | Down | -0.4980433777 |
| GSE19899_A1 | Down | -1.0185233381 |
| GSE19899_A2 | Down | -1.3479811547 |
| PubMed_21979375_A1 | Down | -1.8917412814 |
| PubMed_21979375_A2 | Down | -2.3378219968 |
| GSE35957 | Up | 1.0838134286 |
| GSE36640 | Up | 1.9313159967 |
| GSE54402 | Down | -0.0789648822 |
| GSE9593 | Up | 0.8727554256 |
| GSE43922 | Down | -1.2770934631 |
| GSE24585 | Up | 0.5094268292 |
| GSE37065 | Up | 0.4958720166 |
| GSE28863_A1 | Up | 0.5977105602 |
| GSE28863_A2 | Down | -0.4071658327 |
| GSE28863_A3 | Up | 0.1548832387 |
| GSE28863_A4 | Up | 0.1692770765 |
| GSE48662 | Up | 0.4882841115 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016044 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT017763 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020789 | Reporter assay;Other | Non-Functional MTI | 20584899 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027090 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031653 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
