HCSGD entry for TMEM2
1. General information
| Official gene symbol | TMEM2 |
|---|---|
| Entrez ID | 23670 |
| Gene full name | transmembrane protein 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0007275 | Multicellular organismal development | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0135180768 | 0.2705933703 | 0.2902196574 | 0.9948719235 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.7234480614 |
| GSE13712_SHEAR | Down | -0.0254074681 |
| GSE13712_STATIC | Up | 0.0224609646 |
| GSE19018 | Down | -0.9384898740 |
| GSE19899_A1 | Up | 0.8129364053 |
| GSE19899_A2 | Up | 0.3326880968 |
| PubMed_21979375_A1 | Down | -0.1337441311 |
| PubMed_21979375_A2 | Up | 0.4945337512 |
| GSE35957 | Down | -0.2426769326 |
| GSE36640 | Up | 0.5300510968 |
| GSE54402 | Up | 1.4967532495 |
| GSE9593 | Up | 0.0357838693 |
| GSE43922 | Up | 0.6189916928 |
| GSE24585 | Up | 0.4144874265 |
| GSE37065 | Down | -0.1728516388 |
| GSE28863_A1 | Down | -0.0433883255 |
| GSE28863_A2 | Up | 0.4046224202 |
| GSE28863_A3 | Down | -0.2431786898 |
| GSE28863_A4 | Up | 0.1056417388 |
| GSE48662 | Up | 0.2028806270 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT001585 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-30a-3p | MIMAT0000088 | MIRT001762 | Luciferase reporter assay//qRT-PCR//Western blot | Functional MTI | 16239240 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024372 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT026078 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026372 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-98-5p | MIMAT0000096 | MIRT027580 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029299 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030825 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-let-7d-5p | MIMAT0000065 | MIRT032147 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT043348 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046046 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
