HCSGD entry for LRRC6
1. General information
| Official gene symbol | LRRC6 |
|---|---|
| Entrez ID | 23639 |
| Gene full name | leucine rich repeat containing 6 |
| Other gene symbols | CILD19 LRTP TSLRP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003341 | Cilium movement | IMP | biological_process |
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005737 | Cytoplasm | IDA ISS | cellular_component |
| GO:0005929 | Cilium | IDA | cellular_component |
| GO:0008584 | Male gonad development | ISS | biological_process |
| GO:0030317 | Sperm motility | IMP | biological_process |
| GO:0036158 | Outer dynein arm assembly | IMP | biological_process |
| GO:0036159 | Inner dynein arm assembly | IMP | biological_process |
| GO:0044458 | Motile cilium assembly | IMP | biological_process |
| GO:0060287 | Epithelial cilium movement involved in determination of left/right asymmetry | IMP | biological_process |
| GO:0061458 | Reproductive system development | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1085151286 | 0.9422589795 | 0.6834853327 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0349947898 |
| GSE13712_SHEAR | Up | 0.2587966313 |
| GSE13712_STATIC | Up | 0.7472181626 |
| GSE19018 | Up | 0.0884768727 |
| GSE19899_A1 | Up | 0.0811794042 |
| GSE19899_A2 | Up | 0.0417952694 |
| PubMed_21979375_A1 | Up | 0.0172088092 |
| PubMed_21979375_A2 | Up | 0.1017680683 |
| GSE35957 | Down | -0.1801479610 |
| GSE36640 | Up | 0.1475792824 |
| GSE54402 | Up | 0.2286641674 |
| GSE9593 | Down | -0.0551818019 |
| GSE43922 | Up | 0.3147989090 |
| GSE24585 | Up | 0.1750447098 |
| GSE37065 | Up | 0.1533569886 |
| GSE28863_A1 | Down | -0.1717837714 |
| GSE28863_A2 | Down | -0.1470001492 |
| GSE28863_A3 | Up | 0.3438428922 |
| GSE28863_A4 | Down | -0.0415419396 |
| GSE48662 | Up | 0.3391728457 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
