HCSGD entry for CARHSP1
1. General information
| Official gene symbol | CARHSP1 |
|---|---|
| Entrez ID | 23589 |
| Gene full name | calcium regulated heat stable protein 1, 24kDa |
| Other gene symbols | CRHSP-24 CSDC1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000177 | Cytoplasmic exosome (RNase complex) | ISS | cellular_component |
| GO:0000932 | Cytoplasmic mRNA processing body | IEA | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003730 | MRNA 3'-UTR binding | IDA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005829 | Cytosol | ISS | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0019902 | Phosphatase binding | NAS | molecular_function |
| GO:0035556 | Intracellular signal transduction | TAS | biological_process |
| GO:0043186 | P granule | ISS | cellular_component |
| GO:0043488 | Regulation of mRNA stability | ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9622450667 | 0.0417607386 | 0.9999902473 | 0.3843302098 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3869507214 |
| GSE13712_SHEAR | Down | -0.4826699721 |
| GSE13712_STATIC | Down | -0.2759728510 |
| GSE19018 | Up | 0.1424578923 |
| GSE19899_A1 | Down | -0.3148775624 |
| GSE19899_A2 | Down | -0.3559804609 |
| PubMed_21979375_A1 | Down | -0.4681915513 |
| PubMed_21979375_A2 | Down | -0.4312971369 |
| GSE35957 | Up | 0.1614354030 |
| GSE36640 | Down | -0.4607497180 |
| GSE54402 | Down | -0.1852419420 |
| GSE9593 | Down | -0.2051416820 |
| GSE43922 | Down | -0.5774522702 |
| GSE24585 | Up | 0.1089568536 |
| GSE37065 | Down | -0.0847988355 |
| GSE28863_A1 | Up | 0.1978094092 |
| GSE28863_A2 | Up | 0.1302138962 |
| GSE28863_A3 | Up | 0.0827312228 |
| GSE28863_A4 | Up | 0.0431817224 |
| GSE48662 | Down | -0.0615781515 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-let-7b-5p | MIMAT0000063 | MIRT001645 | pSILAC//Proteomics;Other | Functional MTI (Weak) | 18668040 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020567 | Reporter assay;Other | Functional MTI | 20584899 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045955 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-10a-5p | MIMAT0000253 | MIRT047684 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052503 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3909 | MIMAT0018183 | MIRT052882 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
