HCSGD entry for OTP
1. General information
| Official gene symbol | OTP |
|---|---|
| Entrez ID | 23440 |
| Gene full name | orthopedia homeobox |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000976 | Transcription regulatory region sequence-specific DNA binding | IEA | molecular_function |
| GO:0002052 | Positive regulation of neuroblast proliferation | IEA | biological_process |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0021879 | Forebrain neuron differentiation | IEA | biological_process |
| GO:0021979 | Hypothalamus cell differentiation | IEA | biological_process |
| GO:0021985 | Neurohypophysis development | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7608892519 | 0.8287710953 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0720020600 |
| GSE13712_SHEAR | Down | -0.1329403061 |
| GSE13712_STATIC | Down | -0.0235841951 |
| GSE19018 | Up | 0.0051592859 |
| GSE19899_A1 | Up | 0.0315426990 |
| GSE19899_A2 | Up | 0.0851581153 |
| PubMed_21979375_A1 | Up | 0.0448020893 |
| PubMed_21979375_A2 | Down | -0.0133505623 |
| GSE35957 | Up | 0.1193976151 |
| GSE36640 | Up | 0.0139723178 |
| GSE54402 | Up | 0.0246803825 |
| GSE9593 | Up | 0.0618966844 |
| GSE43922 | Up | 0.1151454930 |
| GSE24585 | Up | 0.1546381649 |
| GSE37065 | Down | -0.0999897423 |
| GSE28863_A1 | Down | -0.0400234363 |
| GSE28863_A2 | Up | 0.1435177890 |
| GSE28863_A3 | Up | 0.0680330361 |
| GSE28863_A4 | Down | -0.0287340749 |
| GSE48662 | Down | -0.0002536691 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-30c-5p | MIMAT0000244 | MIRT047869 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
