HCSGD entry for FRAT2
1. General information
| Official gene symbol | FRAT2 |
|---|---|
| Entrez ID | 23401 |
| Gene full name | frequently rearranged in advanced T-cell lymphomas 2 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005575 | Cellular_component | ND | cellular_component |
| GO:0007275 | Multicellular organismal development | NAS | biological_process |
| GO:0008283 | Cell proliferation | NAS | biological_process |
| GO:0016055 | Wnt signaling pathway | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1007736294 | 0.5850663539 | 0.6618807731 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0392589001 |
| GSE13712_SHEAR | Down | -0.4763276335 |
| GSE13712_STATIC | Down | -0.7888278109 |
| GSE19018 | Up | 0.2319900114 |
| GSE19899_A1 | Up | 0.2515320924 |
| GSE19899_A2 | Up | 0.9057744110 |
| PubMed_21979375_A1 | Up | 0.7592507685 |
| PubMed_21979375_A2 | Up | 0.7598968592 |
| GSE35957 | Up | 0.2139988404 |
| GSE36640 | Up | 0.1194279865 |
| GSE54402 | Up | 0.5615445241 |
| GSE9593 | Down | -0.2401556810 |
| GSE43922 | Up | 0.1182449914 |
| GSE24585 | Down | -0.3479086900 |
| GSE37065 | Up | 0.0227531860 |
| GSE28863_A1 | Down | -0.0728264056 |
| GSE28863_A2 | Down | -0.1202068084 |
| GSE28863_A3 | Up | 0.3007658143 |
| GSE28863_A4 | Up | 0.0896667616 |
| GSE48662 | Down | -0.1179365221 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-22-3p | MIMAT0000077 | MIRT030658 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT039961 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-320a | MIMAT0000510 | MIRT044758 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT046089 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049687 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052736 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
