HCSGD entry for LARP1
1. General information
| Official gene symbol | LARP1 |
|---|---|
| Entrez ID | 23367 |
| Gene full name | La ribonucleoprotein domain family, member 1 |
| Other gene symbols | LARP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0016239 | Positive regulation of macroautophagy | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1978421754 | 0.7195605866 | 0.8598751486 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.2729499999 |
| GSE13712_SHEAR | Up | 0.2059497360 |
| GSE13712_STATIC | Up | 0.1984088924 |
| GSE19018 | Down | -0.0174989462 |
| GSE19899_A1 | Down | -0.0690995811 |
| GSE19899_A2 | Up | 0.6805462388 |
| PubMed_21979375_A1 | Up | 0.0805419378 |
| PubMed_21979375_A2 | Up | 0.4279304482 |
| GSE35957 | Down | -0.2304127465 |
| GSE36640 | Up | 0.0219936114 |
| GSE54402 | Up | 0.0995169851 |
| GSE9593 | Up | 0.3646180191 |
| GSE43922 | Up | 0.0744068471 |
| GSE24585 | Down | -0.3995095998 |
| GSE37065 | Down | -0.2033149832 |
| GSE28863_A1 | Up | 0.3357638541 |
| GSE28863_A2 | Up | 0.4514725081 |
| GSE28863_A3 | Down | -0.0319737834 |
| GSE28863_A4 | Down | -0.2260153875 |
| GSE48662 | Down | -0.2999580097 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022798 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025490 | Proteomics | Functional MTI (Weak) | 21566225 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031766 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037143 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-5p | MIMAT0004949 | MIRT037363 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037417 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-615-3p | MIMAT0003283 | MIRT040006 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041700 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT045859 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT047115 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049290 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-17-5p | MIMAT0000070 | MIRT050810 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7f-5p | MIMAT0000067 | MIRT051377 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052312 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7a-5p | MIMAT0000062 | MIRT052560 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
