HCSGD entry for U2SURP
1. General information
| Official gene symbol | U2SURP |
|---|---|
| Entrez ID | 23350 |
| Gene full name | U2 snRNP-associated SURP domain containing |
| Other gene symbols | SR140 fSAPa |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006396 | RNA processing | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9885601345 | 0.0448487557 | 0.9999902473 | 0.3985320742 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1290248313 |
| GSE13712_SHEAR | Down | -0.1073039553 |
| GSE13712_STATIC | Down | -0.0331138862 |
| GSE19018 | Down | -0.1993441070 |
| GSE19899_A1 | Up | 0.0453202985 |
| GSE19899_A2 | Down | -0.4896264704 |
| PubMed_21979375_A1 | Down | -0.2045970986 |
| PubMed_21979375_A2 | Down | -0.2381467497 |
| GSE35957 | Down | -0.3308752028 |
| GSE36640 | Down | -0.7605080936 |
| GSE54402 | Down | -0.0826185680 |
| GSE9593 | Down | -0.5173234251 |
| GSE43922 | Down | -0.0774265690 |
| GSE24585 | Down | -0.0524194174 |
| GSE37065 | Up | 0.0334946395 |
| GSE28863_A1 | Up | 0.0460603967 |
| GSE28863_A2 | Up | 0.2139881966 |
| GSE28863_A3 | Down | -0.5485341820 |
| GSE28863_A4 | Down | -0.0190659861 |
| GSE48662 | Down | -0.4912294047 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-361-5p | MIMAT0000703 | MIRT020074 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-29c-3p | MIMAT0000681 | MIRT020376 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025568 | Proteomics | Functional MTI (Weak) | 21566225 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
