HCSGD entry for NCAPD3
1. General information
| Official gene symbol | NCAPD3 |
|---|---|
| Entrez ID | 23310 |
| Gene full name | non-SMC condensin II complex, subunit D3 |
| Other gene symbols | CAP-D3 CAPD3 hCAP-D3 hHCP-6 hcp-6 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000793 | Condensed chromosome | IEA | cellular_component |
| GO:0000799 | Nuclear condensin complex | IDA IEA | cellular_component |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0007076 | Mitotic chromosome condensation | IDA IEA | biological_process |
| GO:0031618 | Nuclear centromeric heterochromatin | IDA | cellular_component |
| GO:0035064 | Methylated histone residue binding | IDA | molecular_function |
| GO:0042585 | Germinal vesicle | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9494080810 | 0.0058993085 | 0.9999902473 | 0.1551324351 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0361721393 |
| GSE13712_SHEAR | Down | -0.4730936639 |
| GSE13712_STATIC | Down | -0.4025588554 |
| GSE19018 | Down | -0.0623547424 |
| GSE19899_A1 | Down | -0.5241526871 |
| GSE19899_A2 | Down | -1.2728955407 |
| PubMed_21979375_A1 | Down | -0.7194451945 |
| PubMed_21979375_A2 | Down | -0.8974905409 |
| GSE35957 | Down | -1.1060636265 |
| GSE36640 | Down | -1.7621232482 |
| GSE54402 | Up | 0.1454254580 |
| GSE9593 | Down | -0.6557139072 |
| GSE43922 | Down | -0.2558985332 |
| GSE24585 | Up | 0.0901860061 |
| GSE37065 | Down | -0.3175407317 |
| GSE28863_A1 | Up | 0.1538098177 |
| GSE28863_A2 | Up | 0.9503175101 |
| GSE28863_A3 | Down | -0.3807280347 |
| GSE28863_A4 | Up | 0.1614490536 |
| GSE48662 | Down | -0.6575627254 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023702 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-320a | MIMAT0000510 | MIRT044595 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT045217 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
