HCSGD entry for ZC3H7B
1. General information
| Official gene symbol | ZC3H7B |
|---|---|
| Entrez ID | 23264 |
| Gene full name | zinc finger CCCH-type containing 7B |
| Other gene symbols | RoXaN |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9141295354 | 0.1908226093 | 0.9999902473 | 0.8469885160 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0311225968 |
| GSE13712_SHEAR | Up | 0.0273848710 |
| GSE13712_STATIC | Up | 0.0664591124 |
| GSE19018 | Up | 0.0217121728 |
| GSE19899_A1 | Up | 0.0184291312 |
| GSE19899_A2 | Up | 0.0748110250 |
| PubMed_21979375_A1 | Down | -0.2765023566 |
| PubMed_21979375_A2 | Up | 0.0007637663 |
| GSE35957 | Down | -0.1126192116 |
| GSE36640 | Up | 0.1314244023 |
| GSE54402 | Down | -0.1304544685 |
| GSE9593 | Down | -0.1420167881 |
| GSE43922 | Down | -0.3792149499 |
| GSE24585 | Down | -0.2617390934 |
| GSE37065 | Down | -0.3108063157 |
| GSE28863_A1 | Up | 0.0668334193 |
| GSE28863_A2 | Down | -0.1968727505 |
| GSE28863_A3 | Up | 0.0852203028 |
| GSE28863_A4 | Up | 0.1661694332 |
| GSE48662 | Down | -0.4020828201 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-877-3p | MIMAT0004950 | MIRT036862 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-296-3p | MIMAT0004679 | MIRT038348 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-106b-3p | MIMAT0004672 | MIRT038598 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193a-5p | MIMAT0004614 | MIRT038605 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-421 | MIMAT0003339 | MIRT039423 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041480 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042116 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
