HCSGD entry for CAMTA1
1. General information
| Official gene symbol | CAMTA1 |
|---|---|
| Entrez ID | 23261 |
| Gene full name | calmodulin binding transcription activator 1 |
| Other gene symbols | CANPMR |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9464872649 | 0.2788342274 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1064178001 |
| GSE13712_SHEAR | Down | -0.5025858084 |
| GSE13712_STATIC | Down | -0.3093474154 |
| GSE19018 | Up | 0.1749868383 |
| GSE19899_A1 | Down | -0.1392078302 |
| GSE19899_A2 | Down | -0.0965908874 |
| PubMed_21979375_A1 | Down | -0.1890408054 |
| PubMed_21979375_A2 | Down | -0.2929560272 |
| GSE35957 | Down | -0.1776035240 |
| GSE36640 | Down | -0.4416798229 |
| GSE54402 | Down | -0.0071971224 |
| GSE9593 | Down | -0.0691479186 |
| GSE43922 | Up | 0.0922687469 |
| GSE24585 | Down | -0.1540874322 |
| GSE37065 | Up | 0.1180450307 |
| GSE28863_A1 | Down | -0.0799823175 |
| GSE28863_A2 | Up | 0.1235727512 |
| GSE28863_A3 | Up | 0.1324057892 |
| GSE28863_A4 | Down | -0.0199577927 |
| GSE48662 | Up | 0.0522573374 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT005101 | Microarray | Functional MTI (Weak) | 19193853 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT005101 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-218-5p | MIMAT0000275 | MIRT024244 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025573 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT027874 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-129-5p | MIMAT0000242 | NA | hsa-miR-129-5p | 18189265 | |||
| hsa-miR-9-5p | MIMAT0000441 | NA | hsa-miR-9 | {Western blot} | {downregulation by 2'-O-Me antisense miRNA oligonucleotide} | 21857646 | |
| hsa-miR-9-3p | MIMAT0000442 | NA | hsa-miR-9* | {Western blot} | {downregulation by 2'-O-Me antisense miRNA oligonucleotide} | 21857646 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
