HCSGD entry for SULF1
1. General information
| Official gene symbol | SULF1 |
|---|---|
| Entrez ID | 23213 |
| Gene full name | sulfatase 1 |
| Other gene symbols | HSULF-1 SULF-1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001822 | Kidney development | ISS | biological_process |
| GO:0001937 | Negative regulation of endothelial cell proliferation | IDA | biological_process |
| GO:0002063 | Chondrocyte development | IEA ISS | biological_process |
| GO:0003094 | Glomerular filtration | IEA ISS | biological_process |
| GO:0003824 | Catalytic activity | IEA | molecular_function |
| GO:0004065 | Arylsulfatase activity | IDA IMP | molecular_function |
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005615 | Extracellular space | IDA NAS | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | ISS | cellular_component |
| GO:0005795 | Golgi stack | IEA | cellular_component |
| GO:0005886 | Plasma membrane | IEA ISS | cellular_component |
| GO:0006915 | Apoptotic process | IEA | biological_process |
| GO:0008449 | N-acetylglucosamine-6-sulfatase activity | IDA IMP | molecular_function |
| GO:0008484 | Sulfuric ester hydrolase activity | IEA | molecular_function |
| GO:0009986 | Cell surface | IDA | cellular_component |
| GO:0010575 | Positive regulation vascular endothelial growth factor production | IEA ISS | biological_process |
| GO:0014846 | Esophagus smooth muscle contraction | IEA ISS | biological_process |
| GO:0016525 | Negative regulation of angiogenesis | IDA | biological_process |
| GO:0030177 | Positive regulation of Wnt signaling pathway | IDA | biological_process |
| GO:0030201 | Heparan sulfate proteoglycan metabolic process | IDA IEA NAS | biological_process |
| GO:0030336 | Negative regulation of cell migration | IMP | biological_process |
| GO:0030513 | Positive regulation of BMP signaling pathway | IMP | biological_process |
| GO:0032836 | Glomerular basement membrane development | IEA ISS | biological_process |
| GO:0035860 | Glial cell-derived neurotrophic factor receptor signaling pathway | IEA ISS | biological_process |
| GO:0040036 | Regulation of fibroblast growth factor receptor signaling pathway | IMP | biological_process |
| GO:0040037 | Negative regulation of fibroblast growth factor receptor signaling pathway | IEA IMP ISS | biological_process |
| GO:0045121 | Membrane raft | IDA | cellular_component |
| GO:0048010 | Vascular endothelial growth factor receptor signaling pathway | IDA | biological_process |
| GO:0048706 | Embryonic skeletal system development | IEA ISS | biological_process |
| GO:0051216 | Cartilage development | ISS | biological_process |
| GO:0060348 | Bone development | IEA ISS | biological_process |
| GO:0060384 | Innervation | IEA ISS | biological_process |
| GO:0060686 | Negative regulation of prostatic bud formation | IEA ISS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9858829718 | 0.0000080544 | 0.9999902473 | 0.0069833333 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -1.9071674841 |
| GSE13712_SHEAR | Down | -6.2437205891 |
| GSE13712_STATIC | Down | -1.8463238677 |
| GSE19018 | Down | -0.3095141912 |
| GSE19899_A1 | Down | -2.2148652255 |
| GSE19899_A2 | Down | -1.7887701565 |
| PubMed_21979375_A1 | Down | -5.4895678910 |
| PubMed_21979375_A2 | Down | -6.2556719401 |
| GSE35957 | Up | 0.0707942349 |
| GSE36640 | Down | -2.9567974517 |
| GSE54402 | Down | -2.9259102244 |
| GSE9593 | Down | -0.7518142334 |
| GSE43922 | Down | -1.6996299691 |
| GSE24585 | Down | -0.5546538126 |
| GSE37065 | Up | 0.6506835815 |
| GSE28863_A1 | Down | -0.2743673948 |
| GSE28863_A2 | Up | 0.5257335780 |
| GSE28863_A3 | Down | -0.3761984443 |
| GSE28863_A4 | Down | -0.2591670515 |
| GSE48662 | Down | -0.1224093414 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-516a-3p | MIMAT0006778 | MIRT005970 | Northern blot//qRT-PCR//Western blot | Functional MTI | 21169410 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022965 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-516a-5p | MIMAT0004770 | NA | hsa-miR-516a-5p | {Western blot} | {overexpression} | 21169410 |
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