HCSGD entry for RRS1
1. General information
| Official gene symbol | RRS1 |
|---|---|
| Entrez ID | 23212 |
| Gene full name | RRS1 ribosome biogenesis regulator homolog (S. cerevisiae) |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000794 | Condensed nuclear chromosome | IDA | cellular_component |
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0005783 | Endoplasmic reticulum | IEA | cellular_component |
| GO:0007080 | Mitotic metaphase plate congression | IMP | biological_process |
| GO:0042254 | Ribosome biogenesis | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8122493218 | 0.0049316705 | 0.9999902473 | 0.1427812088 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.7781308687 |
| GSE13712_SHEAR | Up | 0.3036939013 |
| GSE13712_STATIC | Up | 0.1900278561 |
| GSE19018 | Down | -1.7429763994 |
| GSE19899_A1 | Down | -0.8265496618 |
| GSE19899_A2 | Down | -0.0031097653 |
| PubMed_21979375_A1 | Down | -1.2684353147 |
| PubMed_21979375_A2 | Down | -0.2445855921 |
| GSE35957 | Up | 0.1661645888 |
| GSE36640 | Down | -1.0090923513 |
| GSE54402 | Up | 0.1770049190 |
| GSE9593 | Down | -0.2367344054 |
| GSE43922 | Down | -0.4146020452 |
| GSE24585 | Down | -1.4648407369 |
| GSE37065 | Down | -0.0629323349 |
| GSE28863_A1 | Down | -0.3484781525 |
| GSE28863_A2 | Down | -0.0498185772 |
| GSE28863_A3 | Up | 0.0342106089 |
| GSE28863_A4 | Up | 0.0353521667 |
| GSE48662 | Down | -0.3123668583 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-374b-5p | MIMAT0004955 | MIRT016031 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029717 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040785 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041840 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
