HCSGD entry for ZC3H4
1. General information
| Official gene symbol | ZC3H4 |
|---|---|
| Entrez ID | 23211 |
| Gene full name | zinc finger CCCH-type containing 4 |
| Other gene symbols | C19orf7 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9501786216 | 0.1296075529 | 0.9999902473 | 0.6930923202 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1125426406 |
| GSE13712_SHEAR | Up | 0.0239123115 |
| GSE13712_STATIC | Down | -0.1591489656 |
| GSE19018 | Down | -0.5277606342 |
| GSE19899_A1 | Down | -0.3274700965 |
| GSE19899_A2 | Down | -0.2263160346 |
| PubMed_21979375_A1 | Down | -0.1301862104 |
| PubMed_21979375_A2 | Down | -0.1274428423 |
| GSE35957 | Down | -0.1198275469 |
| GSE36640 | Down | -0.6428640072 |
| GSE54402 | Up | 0.0108667156 |
| GSE9593 | Down | -0.3244072309 |
| GSE43922 | Up | 0.0498883117 |
| GSE24585 | Down | -0.0641005341 |
| GSE37065 | Down | -0.1278330779 |
| GSE28863_A1 | Up | 0.1015391952 |
| GSE28863_A2 | Up | 0.0443363077 |
| GSE28863_A3 | Up | 0.4423319220 |
| GSE28863_A4 | Up | 0.0106110914 |
| GSE48662 | Down | -0.0566010652 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-423-3p | MIMAT0001340 | MIRT016686 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT019239 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-331-3p | MIMAT0000760 | MIRT019239 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-183-5p | MIMAT0000261 | MIRT025021 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-34a-5p | MIMAT0000255 | MIRT025317 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028879 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-320a | MIMAT0000510 | MIRT044618 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
