HCSGD entry for SEPT6
1. General information
| Official gene symbol | SEPT6 |
|---|---|
| Entrez ID | 23157 |
| Gene full name | septin 6 |
| Other gene symbols | SEP2 SEPT2 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000777 | Condensed chromosome kinetochore | IEA | cellular_component |
| GO:0000910 | Cytokinesis | TAS | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005525 | GTP binding | IEA TAS | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005819 | Spindle | IEA | cellular_component |
| GO:0007049 | Cell cycle | IEA | biological_process |
| GO:0008021 | Synaptic vesicle | IEA | cellular_component |
| GO:0016032 | Viral process | IEA | biological_process |
| GO:0030496 | Midbody | IEA | cellular_component |
| GO:0031105 | Septin complex | IEA | cellular_component |
| GO:0032154 | Cleavage furrow | IEA | cellular_component |
| GO:0043679 | Axon terminus | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9650816002 | 0.0141344858 | 0.9999902473 | 0.2336706767 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3781370065 |
| GSE13712_SHEAR | Down | -0.1104688580 |
| GSE13712_STATIC | Up | 0.0297165970 |
| GSE19018 | Down | -0.0779472675 |
| GSE19899_A1 | Down | -0.4168766555 |
| GSE19899_A2 | Down | -0.8786486799 |
| PubMed_21979375_A1 | Down | -1.2120675532 |
| PubMed_21979375_A2 | Down | -0.9910276186 |
| GSE35957 | Down | -0.1942497177 |
| GSE36640 | Down | -0.9208802467 |
| GSE54402 | Down | -0.5508080223 |
| GSE9593 | Down | -0.0885964035 |
| GSE43922 | Down | -0.5405457563 |
| GSE24585 | Up | 0.3240542153 |
| GSE37065 | Up | 0.4541533727 |
| GSE28863_A1 | Down | -0.1912370156 |
| GSE28863_A2 | Down | -0.0392266505 |
| GSE28863_A3 | Up | 0.1898645866 |
| GSE28863_A4 | Down | -0.0075975628 |
| GSE48662 | Down | -0.1058546410 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023626 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
