HCSGD entry for TMCC1
1. General information
| Official gene symbol | TMCC1 |
|---|---|
| Entrez ID | 23023 |
| Gene full name | transmembrane and coiled-coil domain family 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0589859352 | 0.9313801565 | 0.5266301254 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0081144791 |
| GSE13712_SHEAR | Up | 0.2771323100 |
| GSE13712_STATIC | Down | -0.0614844912 |
| GSE19018 | Up | 0.0480987448 |
| GSE19899_A1 | Up | 0.2343836462 |
| GSE19899_A2 | Up | 0.7247269210 |
| PubMed_21979375_A1 | Up | 0.1873939496 |
| PubMed_21979375_A2 | Up | 0.7970486663 |
| GSE35957 | Up | 0.0264999565 |
| GSE36640 | Up | 0.9623203668 |
| GSE54402 | Up | 0.2907502465 |
| GSE9593 | Up | 0.0966081165 |
| GSE43922 | Up | 0.4614031156 |
| GSE24585 | Down | -0.1266888450 |
| GSE37065 | Down | -0.0238160412 |
| GSE28863_A1 | Up | 0.0042798318 |
| GSE28863_A2 | Up | 0.0327040207 |
| GSE28863_A3 | Down | -0.2080940473 |
| GSE28863_A4 | Down | -0.2442768884 |
| GSE48662 | Up | 0.3574309334 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-1 | MIMAT0000416 | MIRT023737 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-103a-3p | MIMAT0000101 | MIRT027104 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031658 | Sequencing | Functional MTI (Weak) | 20371350 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
