HCSGD entry for PALLD
1. General information
| Official gene symbol | PALLD |
|---|---|
| Entrez ID | 23022 |
| Gene full name | palladin, cytoskeletal associated protein |
| Other gene symbols | CGI151 MYN PNCA1 SIH002 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0001726 | Ruffle | IEA | cellular_component |
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005884 | Actin filament | IDA | cellular_component |
| GO:0005925 | Focal adhesion | IEA | cellular_component |
| GO:0007010 | Cytoskeleton organization | NAS | biological_process |
| GO:0030018 | Z disc | IEA | cellular_component |
| GO:0030027 | Lamellipodium | IEA | cellular_component |
| GO:0051371 | Muscle alpha-actinin binding | TAS | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9864825463 | 0.0010416246 | 0.9999902473 | 0.0614721973 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.6209568334 |
| GSE13712_SHEAR | Down | -1.0088787752 |
| GSE13712_STATIC | Down | -0.0375119245 |
| GSE19018 | Down | -0.2083560497 |
| GSE19899_A1 | Down | -1.6889171562 |
| GSE19899_A2 | Down | -1.3820856195 |
| PubMed_21979375_A1 | Down | -2.6910205639 |
| PubMed_21979375_A2 | Down | -1.2599910663 |
| GSE35957 | Up | 0.5414125137 |
| GSE36640 | Up | 0.0843939982 |
| GSE54402 | Down | -1.1558672802 |
| GSE9593 | Up | 0.4602631838 |
| GSE43922 | Down | -1.2083081455 |
| GSE24585 | Down | -0.4675389209 |
| GSE37065 | Down | -0.3802606855 |
| GSE28863_A1 | Down | -0.0252794453 |
| GSE28863_A2 | Down | -0.1990415297 |
| GSE28863_A3 | Down | -0.1792439799 |
| GSE28863_A4 | Down | -0.0338259508 |
| GSE48662 | Up | 0.0611006667 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020550 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022312 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-21-5p | MIMAT0000076 | MIRT030662 | Microarray | Functional MTI (Weak) | 18591254 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT031101 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-196a-5p | MIMAT0000226 | MIRT048248 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
