HCSGD entry for DHX30
1. General information
| Official gene symbol | DHX30 |
|---|---|
| Entrez ID | 22907 |
| Gene full name | DEAH (Asp-Glu-Ala-His) box polypeptide 30 |
| Other gene symbols | DDX30 RETCOR |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003682 | Chromatin binding | IDA | molecular_function |
| GO:0003725 | Double-stranded RNA binding | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005739 | Mitochondrion | IDA | cellular_component |
| GO:0008026 | ATP-dependent helicase activity | IEA | molecular_function |
| GO:0042645 | Mitochondrial nucleoid | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2791337905 | 0.8780849702 | 0.9762264815 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1143605022 |
| GSE13712_SHEAR | Down | -0.0533501000 |
| GSE13712_STATIC | Up | 0.0621839360 |
| GSE19018 | Down | -0.0132698884 |
| GSE19899_A1 | Up | 0.0541300681 |
| GSE19899_A2 | Up | 0.4342608515 |
| PubMed_21979375_A1 | Up | 0.3905125751 |
| PubMed_21979375_A2 | Up | 0.7912214551 |
| GSE35957 | Down | -0.1539178599 |
| GSE36640 | Down | -0.2120176003 |
| GSE54402 | Up | 0.1031319614 |
| GSE9593 | Down | -0.2322316121 |
| GSE43922 | Up | 0.2835632873 |
| GSE24585 | Down | -0.1927843978 |
| GSE37065 | Down | -0.0255150755 |
| GSE28863_A1 | Up | 0.3859495573 |
| GSE28863_A2 | Up | 0.2541742932 |
| GSE28863_A3 | Down | -0.0483105790 |
| GSE28863_A4 | Down | -0.2170528720 |
| GSE48662 | Up | 0.0455616880 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029845 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-miR-93-3p | MIMAT0004509 | MIRT038885 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-589-3p | MIMAT0003256 | MIRT040503 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-193b-3p | MIMAT0002819 | MIRT041576 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041892 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-149-5p | MIMAT0000450 | MIRT045535 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046475 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT048943 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT051274 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052709 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
