HCSGD entry for ABLIM3
1. General information
| Official gene symbol | ABLIM3 |
|---|---|
| Entrez ID | 22885 |
| Gene full name | actin binding LIM protein family, member 3 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003779 | Actin binding | IEA | molecular_function |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0007411 | Axon guidance | TAS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0030036 | Actin cytoskeleton organization | IEA | biological_process |
| GO:0045944 | Positive regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0021034535 | 0.9439175563 | 0.1235251101 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 1.7887073370 |
| GSE13712_SHEAR | Up | 0.3084908754 |
| GSE13712_STATIC | Up | 0.0202969107 |
| GSE19018 | Up | 0.6457059621 |
| GSE19899_A1 | Up | 0.5761162481 |
| GSE19899_A2 | Up | 0.5688578542 |
| PubMed_21979375_A1 | Down | -0.3063758818 |
| PubMed_21979375_A2 | Up | 1.2711743480 |
| GSE35957 | Up | 1.0186585132 |
| GSE36640 | Up | 1.2629519190 |
| GSE54402 | Up | 0.4354925184 |
| GSE9593 | Up | 1.6708552964 |
| GSE43922 | Up | 0.1445027955 |
| GSE24585 | Down | -0.0297289032 |
| GSE37065 | Up | 0.2659759845 |
| GSE28863_A1 | Down | -0.3732704361 |
| GSE28863_A2 | Up | 0.2907667473 |
| GSE28863_A3 | Down | -0.7513991326 |
| GSE28863_A4 | Down | -0.0736866466 |
| GSE48662 | Up | 0.2802718108 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
