HCSGD entry for R3HDM2
1. General information
| Official gene symbol | R3HDM2 |
|---|---|
| Entrez ID | 22864 |
| Gene full name | R3H domain containing 2 |
| Other gene symbols | PR01365 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9069773717 | 0.0662059116 | 0.9999902473 | 0.4853661102 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3232268840 |
| GSE13712_SHEAR | Down | -0.3610857268 |
| GSE13712_STATIC | Down | -0.3141818480 |
| GSE19018 | Up | 0.0528708063 |
| GSE19899_A1 | Down | -0.8226064885 |
| GSE19899_A2 | Down | -0.4717179163 |
| PubMed_21979375_A1 | Down | -0.3626628192 |
| PubMed_21979375_A2 | Down | -0.3085363712 |
| GSE35957 | Down | -0.4316049939 |
| GSE36640 | Up | 0.0981708130 |
| GSE54402 | Down | -0.0420605925 |
| GSE9593 | Up | 0.2239346000 |
| GSE43922 | Down | -0.3726413671 |
| GSE24585 | Up | 0.3464830186 |
| GSE37065 | Down | -0.0757513307 |
| GSE28863_A1 | Up | 0.2197163509 |
| GSE28863_A2 | Down | -0.0314463810 |
| GSE28863_A3 | Up | 0.1477832992 |
| GSE28863_A4 | Down | -0.0236860464 |
| GSE48662 | Up | 0.3139320511 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-671-5p | MIMAT0003880 | MIRT039289 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045897 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7c-5p | MIMAT0000064 | MIRT051728 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
