HCSGD entry for ZNF652
1. General information
| Official gene symbol | ZNF652 |
|---|---|
| Entrez ID | 22834 |
| Gene full name | zinc finger protein 652 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1889472095 | 0.3336832263 | 0.8469738338 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2322155212 |
| GSE13712_SHEAR | Down | -0.4964385156 |
| GSE13712_STATIC | Down | -0.5453341521 |
| GSE19018 | Up | 0.1168995903 |
| GSE19899_A1 | Down | -0.2307654708 |
| GSE19899_A2 | Down | -0.5165251948 |
| PubMed_21979375_A1 | Down | -0.2500545687 |
| PubMed_21979375_A2 | Up | 0.0170599719 |
| GSE35957 | Up | 0.7067006833 |
| GSE36640 | Up | 0.8985455497 |
| GSE54402 | Down | -0.4089346198 |
| GSE9593 | Up | 0.3137054271 |
| GSE43922 | Down | -0.0091377477 |
| GSE24585 | Up | 0.0938764687 |
| GSE37065 | Up | 0.0554046292 |
| GSE28863_A1 | Up | 0.5294329519 |
| GSE28863_A2 | Up | 0.3865716394 |
| GSE28863_A3 | Up | 0.1379254787 |
| GSE28863_A4 | Up | 0.0802021730 |
| GSE48662 | Up | 0.4515961986 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT000975 | Luciferase reporter assay | Functional MTI | 18367535 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT000975 | Reporter assay;Other | Functional MTI | 20584899 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021105 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-132-3p | MIMAT0000426 | MIRT021763 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-128-3p | MIMAT0000424 | MIRT021897 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-221-3p | MIMAT0000278 | MIRT024148 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-215-5p | MIMAT0000272 | MIRT024769 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-181a-5p | MIMAT0000256 | MIRT025073 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026163 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT028923 | Microarray | Functional MTI (Weak) | 19088304 |
| hsa-let-7e-5p | MIMAT0000066 | MIRT051578 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-let-7b-5p | MIMAT0000063 | MIRT052080 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
