HCSGD entry for ABCD2
1. General information
| Official gene symbol | ABCD2 |
|---|---|
| Entrez ID | 225 |
| Gene full name | ATP-binding cassette, sub-family D (ALD), member 2 |
| Other gene symbols | ABC39 ALDL1 ALDR ALDRP hALDR |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000038 | Very long-chain fatty acid metabolic process | IDA | biological_process |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0005777 | Peroxisome | IDA | cellular_component |
| GO:0005778 | Peroxisomal membrane | TAS | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006635 | Fatty acid beta-oxidation | IGI | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0032000 | Positive regulation of fatty acid beta-oxidation | IDA | biological_process |
| GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | molecular_function |
| GO:0042760 | Very long-chain fatty acid catabolic process | IGI | biological_process |
| GO:0042803 | Protein homodimerization activity | IDA | molecular_function |
| GO:0043231 | Intracellular membrane-bounded organelle | IDA | cellular_component |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2099814559 | 0.6976298849 | 0.8830359323 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0557595916 |
| GSE13712_SHEAR | Down | -0.1421660324 |
| GSE13712_STATIC | Up | 0.0948507691 |
| GSE19018 | Up | 0.2626517256 |
| GSE19899_A1 | Up | 0.3407376896 |
| GSE19899_A2 | Down | -0.0214809894 |
| PubMed_21979375_A1 | Down | -0.1316841124 |
| PubMed_21979375_A2 | Up | 0.1513024007 |
| GSE35957 | Down | -0.0329436265 |
| GSE36640 | Down | -0.0316051107 |
| GSE54402 | Down | -0.0717070419 |
| GSE9593 | Down | -0.1177456730 |
| GSE43922 | Up | 0.0122442567 |
| GSE24585 | Up | 1.7206828407 |
| GSE37065 | Down | -0.0376953706 |
| GSE28863_A1 | Down | -0.1099473461 |
| GSE28863_A2 | Down | -0.0210580008 |
| GSE28863_A3 | Up | 0.0110082303 |
| GSE28863_A4 | Down | -0.0745822603 |
| GSE48662 | Up | 0.0706478302 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
