HCSGD entry for SCUBE3
1. General information
| Official gene symbol | SCUBE3 |
|---|---|
| Entrez ID | 222663 |
| Gene full name | signal peptide, CUB domain, EGF-like 3 |
| Other gene symbols | CEGF3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005509 | Calcium ion binding | IEA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005576 | Extracellular region | IEA | cellular_component |
| GO:0009986 | Cell surface | IDA | cellular_component |
| GO:0051260 | Protein homooligomerization | IDA | biological_process |
| GO:0051291 | Protein heterooligomerization | IPI | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0047370731 | 0.4609191824 | 0.1812274709 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0598712297 |
| GSE13712_SHEAR | Down | -0.5642033594 |
| GSE13712_STATIC | Down | -0.1462731156 |
| GSE19018 | Down | -0.0686244212 |
| GSE19899_A1 | Up | 1.2367615056 |
| GSE19899_A2 | Up | 1.3245578351 |
| PubMed_21979375_A1 | Down | -0.2424093193 |
| PubMed_21979375_A2 | Down | -0.0522217754 |
| GSE35957 | Up | 0.2303265048 |
| GSE36640 | Up | 2.8624001075 |
| GSE54402 | Up | 1.5748383243 |
| GSE9593 | Up | 0.4136170120 |
| GSE43922 | Up | 0.8426460754 |
| GSE24585 | Down | -0.0032452429 |
| GSE37065 | Down | -0.4361804848 |
| GSE28863_A1 | Up | 0.4332173367 |
| GSE28863_A2 | Down | -0.4465503509 |
| GSE28863_A3 | Down | -0.1378635170 |
| GSE28863_A4 | Down | -0.0192238776 |
| GSE48662 | Up | 0.6501868436 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
