HCSGD entry for TWISTNB
1. General information
| Official gene symbol | TWISTNB |
|---|---|
| Entrez ID | 221830 |
| Gene full name | TWIST neighbor |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003899 | DNA-directed RNA polymerase activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0015630 | Microtubule cytoskeleton | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3555794461 | 0.1073092626 | 0.9999902473 | 0.6268280293 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0740027758 |
| GSE13712_SHEAR | Up | 0.7021066380 |
| GSE13712_STATIC | Up | 0.8779171175 |
| GSE19018 | Down | -0.9087026344 |
| GSE19899_A1 | Down | -0.0520728541 |
| GSE19899_A2 | Down | -0.0286351719 |
| PubMed_21979375_A1 | Up | 1.2818596883 |
| PubMed_21979375_A2 | Up | 0.3638118669 |
| GSE35957 | Up | 0.0233937461 |
| GSE36640 | Down | -0.4426755729 |
| GSE54402 | Down | -0.0023393057 |
| GSE9593 | Down | -0.6146347053 |
| GSE43922 | Up | 0.0542830503 |
| GSE24585 | Down | -0.2948173539 |
| GSE37065 | Down | -0.0788867009 |
| GSE28863_A1 | Down | -0.1808754397 |
| GSE28863_A2 | Up | 0.4503841404 |
| GSE28863_A3 | Down | -0.5436319818 |
| GSE28863_A4 | Down | -0.2969920735 |
| GSE48662 | Down | -0.0867504837 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-9-5p | MIMAT0000441 | MIRT021399 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-9-5p | MIMAT0000441 | MIRT021399 | Microarray | Functional MTI (Weak) | 17612493 |
| hsa-miR-96-5p | MIMAT0000095 | MIRT027899 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-92a-3p | MIMAT0000092 | MIRT049378 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-3176 | MIMAT0015053 | MIRT052792 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
