HCSGD entry for SYCP2L
1. General information
| Official gene symbol | SYCP2L |
|---|---|
| Entrez ID | 221711 |
| Gene full name | synaptonemal complex protein 2-like |
| Other gene symbols | C6orf177 NO145 dJ62D2.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.5327255271 | 0.8983724479 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0358019649 |
| GSE13712_SHEAR | Down | -0.1092865744 |
| GSE13712_STATIC | Down | -0.0241572764 |
| GSE19018 | Down | -0.1244997935 |
| GSE19899_A1 | Up | 0.0040949298 |
| GSE19899_A2 | Up | 0.0591280779 |
| PubMed_21979375_A1 | Down | -0.0337414791 |
| PubMed_21979375_A2 | Up | 0.2888970851 |
| GSE35957 | Up | 0.2094154303 |
| GSE36640 | Up | 0.1013398949 |
| GSE54402 | Down | -0.0611365911 |
| GSE9593 | Up | 0.1417536105 |
| GSE43922 | Up | 0.0162781793 |
| GSE24585 | Up | 0.3131910483 |
| GSE37065 | Up | 0.1162491512 |
| GSE28863_A1 | Up | 0.0096667436 |
| GSE28863_A2 | Up | 0.0656200064 |
| GSE28863_A3 | Up | 0.0691857379 |
| GSE28863_A4 | Up | 0.0354562131 |
| GSE48662 | Up | 0.0135063574 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT016704 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
