HCSGD entry for C6orf89
1. General information
| Official gene symbol | C6orf89 |
|---|---|
| Entrez ID | 221477 |
| Gene full name | chromosome 6 open reading frame 89 |
| Other gene symbols | BRAP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000139 | Golgi membrane | IEA | cellular_component |
| GO:0005730 | Nucleolus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005886 | Plasma membrane | IDA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030496 | Midbody | IEA | cellular_component |
| GO:0042060 | Wound healing | IDA | biological_process |
| GO:0045787 | Positive regulation of cell cycle | IDA | biological_process |
| GO:0050673 | Epithelial cell proliferation | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1141105581 | 0.7001416815 | 0.6951650162 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1543323536 |
| GSE13712_SHEAR | Up | 0.0785378782 |
| GSE13712_STATIC | Up | 0.1282438962 |
| GSE19018 | Up | 0.0130408732 |
| GSE19899_A1 | Down | -0.1258777671 |
| GSE19899_A2 | Down | -0.0490305780 |
| PubMed_21979375_A1 | Down | -0.7334023860 |
| PubMed_21979375_A2 | Up | 0.3407357910 |
| GSE35957 | Up | 0.2242603520 |
| GSE36640 | Up | 1.1100080808 |
| GSE54402 | Down | -0.2375761349 |
| GSE9593 | Up | 0.3523723393 |
| GSE43922 | Up | 0.1634692874 |
| GSE24585 | Up | 0.2553518393 |
| GSE37065 | Down | -0.0448170401 |
| GSE28863_A1 | Up | 0.5236461582 |
| GSE28863_A2 | Up | 0.2276719629 |
| GSE28863_A3 | Down | -0.3381983784 |
| GSE28863_A4 | Down | -0.4617383766 |
| GSE48662 | Up | 0.5296452503 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022490 | Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
