HCSGD entry for HNRNPA3
1. General information
| Official gene symbol | HNRNPA3 |
|---|---|
| Entrez ID | 220988 |
| Gene full name | heterogeneous nuclear ribonucleoprotein A3 |
| Other gene symbols | 2610510D13Rik D10S102 FBRNP HNRPA3 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000166 | Nucleotide binding | IEA | molecular_function |
| GO:0000398 | MRNA splicing, via spliceosome | IC TAS | biological_process |
| GO:0003723 | RNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0005730 | Nucleolus | IDA | cellular_component |
| GO:0008380 | RNA splicing | TAS | biological_process |
| GO:0010467 | Gene expression | TAS | biological_process |
| GO:0030529 | Ribonucleoprotein complex | TAS | cellular_component |
| GO:0071013 | Catalytic step 2 spliceosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9909694123 | 0.0044020212 | 0.9999902473 | 0.1350414918 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.5824442308 |
| GSE13712_SHEAR | Up | 0.0865246225 |
| GSE13712_STATIC | Down | -0.0636146331 |
| GSE19018 | Down | -0.8116488041 |
| GSE19899_A1 | Down | -1.0509801963 |
| GSE19899_A2 | Down | -1.1489124348 |
| PubMed_21979375_A1 | Down | -1.0408284181 |
| PubMed_21979375_A2 | Down | -1.0981391534 |
| GSE35957 | Down | -0.4806713384 |
| GSE36640 | Down | -0.8830509733 |
| GSE54402 | Down | -0.3316217448 |
| GSE9593 | Down | -0.7690053620 |
| GSE43922 | - | - |
| GSE24585 | - | - |
| GSE37065 | - | - |
| GSE28863_A1 | Up | 0.0062376746 |
| GSE28863_A2 | Up | 0.1746980986 |
| GSE28863_A3 | Up | 0.0051803115 |
| GSE28863_A4 | Up | 0.4052409962 |
| GSE48662 | Down | -0.2609310916 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-155-5p | MIMAT0000646 | MIRT020978 | Proteomics | Functional MTI (Weak) | 19193853 |
| hsa-miR-155-5p | MIMAT0000646 | MIRT020978 | Proteomics | Functional MTI (Weak) | 17881434 |
| hsa-miR-1 | MIMAT0000416 | MIRT024046 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-1229-3p | MIMAT0005584 | MIRT036353 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1224-3p | MIMAT0005459 | MIRT036550 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-505-3p | MIMAT0002876 | MIRT040992 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT041738 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-346 | MIMAT0000773 | MIRT042699 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-1260b | MIMAT0015041 | MIRT052673 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
