HCSGD entry for ZNF438
1. General information
| Official gene symbol | ZNF438 |
|---|---|
| Entrez ID | 220929 |
| Gene full name | zinc finger protein 438 |
| Other gene symbols | bA330O11.1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IDA | molecular_function |
| GO:0005634 | Nucleus | IDA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0045892 | Negative regulation of transcription, DNA-templated | IDA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0015221876 | 0.9833786216 | 0.1047104167 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.1311425633 |
| GSE13712_SHEAR | Up | 1.5239101190 |
| GSE13712_STATIC | Up | 1.0480290603 |
| GSE19018 | Up | 0.0964630565 |
| GSE19899_A1 | Up | 0.4716881706 |
| GSE19899_A2 | Up | 1.8890416113 |
| PubMed_21979375_A1 | Up | 3.5575151714 |
| PubMed_21979375_A2 | Up | 1.5512849600 |
| GSE35957 | Up | 0.1041512335 |
| GSE36640 | Down | -0.4243870613 |
| GSE54402 | Up | 0.7146872633 |
| GSE9593 | Up | 0.1408386400 |
| GSE43922 | Up | 2.4909237788 |
| GSE24585 | Down | -0.0622043263 |
| GSE37065 | Up | 0.1934509631 |
| GSE28863_A1 | Up | 0.1593354550 |
| GSE28863_A2 | Up | 0.1789272174 |
| GSE28863_A3 | Down | -0.0814726725 |
| GSE28863_A4 | Up | 0.0321398106 |
| GSE48662 | Down | -0.0245130251 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
