HCSGD entry for RNF152
1. General information
| Official gene symbol | RNF152 |
|---|---|
| Entrez ID | 220441 |
| Gene full name | ring finger protein 152 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004842 | Ubiquitin-protein ligase activity | IDA | molecular_function |
| GO:0005764 | Lysosome | IDA | cellular_component |
| GO:0005765 | Lysosomal membrane | IEA | cellular_component |
| GO:0006915 | Apoptotic process | TAS | biological_process |
| GO:0008270 | Zinc ion binding | IEA | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0070936 | Protein K48-linked ubiquitination | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2578437939 | 0.3793525170 | 0.9513119552 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0256970876 |
| GSE13712_SHEAR | Down | -0.0491897064 |
| GSE13712_STATIC | Down | -0.1404740977 |
| GSE19018 | Down | -0.1765918878 |
| GSE19899_A1 | Up | 0.0336959611 |
| GSE19899_A2 | Up | 0.0050195597 |
| PubMed_21979375_A1 | Down | -0.8054978187 |
| PubMed_21979375_A2 | Up | 0.1666570613 |
| GSE35957 | Down | -0.0180503501 |
| GSE36640 | Up | 2.1233366522 |
| GSE54402 | Up | 0.6015959630 |
| GSE9593 | Down | -0.0709048876 |
| GSE43922 | Up | 0.4521298603 |
| GSE24585 | Down | -0.5923101156 |
| GSE37065 | Down | -0.0391618466 |
| GSE28863_A1 | Down | -0.1989347668 |
| GSE28863_A2 | Up | 0.0870851042 |
| GSE28863_A3 | Down | -0.0365154897 |
| GSE28863_A4 | Down | -0.0481903401 |
| GSE48662 | Up | 0.0774728338 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-652-3p | MIMAT0003322 | MIRT039527 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
