HCSGD entry for FANCF
1. General information
| Official gene symbol | FANCF |
|---|---|
| Entrez ID | 2188 |
| Gene full name | Fanconi anemia, complementation group F |
| Other gene symbols | FAF |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003674 | Molecular_function | ND | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005654 | Nucleoplasm | TAS | cellular_component |
| GO:0006281 | DNA repair | TAS | biological_process |
| GO:0008150 | Biological_process | ND | biological_process |
| GO:0043240 | Fanconi anaemia nuclear complex | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9919246495 | 0.0092122184 | 0.9999902473 | 0.1894334375 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1325508815 |
| GSE13712_SHEAR | Down | -0.3401313896 |
| GSE13712_STATIC | Down | -0.6451517986 |
| GSE19018 | Down | -0.5137378047 |
| GSE19899_A1 | Down | -0.3037165526 |
| GSE19899_A2 | Down | -0.9192182076 |
| PubMed_21979375_A1 | Down | -0.3117416521 |
| PubMed_21979375_A2 | Down | -1.4419080323 |
| GSE35957 | Down | -0.2956723712 |
| GSE36640 | Down | -0.6482910391 |
| GSE54402 | Down | -0.1150708733 |
| GSE9593 | Down | -0.2229041590 |
| GSE43922 | Down | -0.5486499583 |
| GSE24585 | Down | -0.2593919517 |
| GSE37065 | Up | 0.1257045307 |
| GSE28863_A1 | Up | 0.1874403244 |
| GSE28863_A2 | Up | 0.0453091468 |
| GSE28863_A3 | Down | -0.4682313315 |
| GSE28863_A4 | Down | -0.0934449213 |
| GSE48662 | Down | -0.0926687229 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
