HCSGD entry for STOM
1. General information
| Official gene symbol | STOM |
|---|---|
| Entrez ID | 2040 |
| Gene full name | stomatin |
| Other gene symbols | BND7 EPB7 EPB72 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005737 | Cytoplasm | IDA | cellular_component |
| GO:0005856 | Cytoskeleton | IDA | cellular_component |
| GO:0005887 | Integral component of plasma membrane | IDA IEA | cellular_component |
| GO:0042470 | Melanosome | IEA | cellular_component |
| GO:0042802 | Identical protein binding | IEA | molecular_function |
| GO:0045121 | Membrane raft | IDA | cellular_component |
| GO:0051260 | Protein homooligomerization | IDA | biological_process |
| GO:0070062 | Extracellular vesicular exosome | IDA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.1961114623 | 0.2112454428 | 0.8576219638 | 0.8869892965 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1590894962 |
| GSE13712_SHEAR | Down | -0.1786710565 |
| GSE13712_STATIC | Up | 0.1353699992 |
| GSE19018 | Down | -0.3461471572 |
| GSE19899_A1 | Down | -0.4545617657 |
| GSE19899_A2 | Up | 0.1916806200 |
| PubMed_21979375_A1 | Down | -0.0247561879 |
| PubMed_21979375_A2 | Up | 0.3468585922 |
| GSE35957 | Down | -0.1155402476 |
| GSE36640 | Up | 0.9449871954 |
| GSE54402 | Down | -1.0575191561 |
| GSE9593 | Down | -0.2872525957 |
| GSE43922 | Up | 0.0558838919 |
| GSE24585 | Up | 0.2848565938 |
| GSE37065 | Up | 0.3665202584 |
| GSE28863_A1 | Up | 0.2463965934 |
| GSE28863_A2 | Down | -0.0906322111 |
| GSE28863_A3 | Down | -0.6088041926 |
| GSE28863_A4 | Up | 0.3486843445 |
| GSE48662 | Up | 0.0116152232 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT002586 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT002586 | Proteomics;Microarray | Functional MTI (Weak) | 18668037 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
