HCSGD entry for VMA21
1. General information
| Official gene symbol | VMA21 |
|---|---|
| Entrez ID | 203547 |
| Gene full name | VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) |
| Other gene symbols | MEAX XMEA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005764 | Lysosome | IDA | cellular_component |
| GO:0005789 | Endoplasmic reticulum membrane | IDA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0030127 | COPII vesicle coat | IDA | cellular_component |
| GO:0033116 | Endoplasmic reticulum-Golgi intermediate compartment membrane | IEA | cellular_component |
| GO:0070072 | Vacuolar proton-transporting V-type ATPase complex assembly | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6731093803 | 0.3534719805 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0277378570 |
| GSE13712_SHEAR | Down | -0.0042578644 |
| GSE13712_STATIC | Up | 0.2252839140 |
| GSE19018 | Down | -0.2514998616 |
| GSE19899_A1 | Down | -0.1197310108 |
| GSE19899_A2 | Up | 0.0920876381 |
| PubMed_21979375_A1 | Up | 0.3166643751 |
| PubMed_21979375_A2 | Up | 0.0809741614 |
| GSE35957 | Up | 0.3146601836 |
| GSE36640 | Down | -0.6791872938 |
| GSE54402 | Up | 0.1797537064 |
| GSE9593 | Up | 0.0989847916 |
| GSE43922 | Up | 0.0065826664 |
| GSE24585 | Down | -0.4466286362 |
| GSE37065 | Up | 0.0442296343 |
| GSE28863_A1 | Down | -0.1080410264 |
| GSE28863_A2 | Down | -0.0693601873 |
| GSE28863_A3 | Down | -0.3412093378 |
| GSE28863_A4 | Up | 0.2559511047 |
| GSE48662 | Down | -0.0112451174 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-331-3p | MIMAT0000760 | MIRT019237 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT028052 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-16-5p | MIMAT0000069 | MIRT031550 | Proteomics | Functional MTI (Weak) | 18668040 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040777 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-330-3p | MIMAT0000751 | MIRT043847 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
