HCSGD entry for TSNARE1
1. General information
| Official gene symbol | TSNARE1 |
|---|---|
| Entrez ID | 203062 |
| Gene full name | t-SNARE domain containing 1 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000149 | SNARE binding | IBA | molecular_function |
| GO:0005484 | SNAP receptor activity | IBA | molecular_function |
| GO:0006886 | Intracellular protein transport | IBA | biological_process |
| GO:0016020 | Membrane | IEA | cellular_component |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0016079 | Synaptic vesicle exocytosis | IBA | biological_process |
| GO:0016192 | Vesicle-mediated transport | IEA | biological_process |
| GO:0031201 | SNARE complex | IBA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8204449109 | 0.7967116143 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0921871154 |
| GSE13712_SHEAR | Down | -0.0034438591 |
| GSE13712_STATIC | Up | 0.0119356799 |
| GSE19018 | Up | 0.0726126775 |
| GSE19899_A1 | Up | 0.0574357661 |
| GSE19899_A2 | Up | 0.0236726581 |
| PubMed_21979375_A1 | Down | -0.2231016457 |
| PubMed_21979375_A2 | Down | -0.0048384245 |
| GSE35957 | Up | 0.1198355384 |
| GSE36640 | Down | -0.0024579053 |
| GSE54402 | Down | -0.1612207433 |
| GSE9593 | Up | 0.0504497025 |
| GSE43922 | Up | 0.0394489084 |
| GSE24585 | Down | -0.0980183712 |
| GSE37065 | Down | -0.0499424973 |
| GSE28863_A1 | Down | -0.0763694429 |
| GSE28863_A2 | Up | 0.0386378165 |
| GSE28863_A3 | Up | 0.2386453559 |
| GSE28863_A4 | Up | 0.0774332450 |
| GSE48662 | Up | 0.1733192517 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT017957 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
