HCSGD entry for ZSCAN4
1. General information
| Official gene symbol | ZSCAN4 |
|---|---|
| Entrez ID | 201516 |
| Gene full name | zinc finger and SCAN domain containing 4 |
| Other gene symbols | ZNF494 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000784 | Nuclear chromosome, telomeric region | ISS | cellular_component |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0010833 | Telomere maintenance via telomere lengthening | ISS | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3513881995 | 0.9479488241 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3663372915 |
| GSE13712_SHEAR | Up | 0.0114617170 |
| GSE13712_STATIC | Up | 0.0316460028 |
| GSE19018 | Up | 0.0401628183 |
| GSE19899_A1 | Up | 0.0799906158 |
| GSE19899_A2 | Up | 0.1772555412 |
| PubMed_21979375_A1 | Up | 0.1357335378 |
| PubMed_21979375_A2 | Down | -0.1184210244 |
| GSE35957 | Up | 0.2910644922 |
| GSE36640 | Up | 0.0221513608 |
| GSE54402 | Down | -0.0110704659 |
| GSE9593 | Up | 0.0997360862 |
| GSE43922 | Up | 0.0194052339 |
| GSE24585 | Up | 0.2421467923 |
| GSE37065 | Up | 0.0621762153 |
| GSE28863_A1 | Up | 0.0066810305 |
| GSE28863_A2 | Down | -0.0354301967 |
| GSE28863_A3 | Up | 0.0283648978 |
| GSE28863_A4 | Up | 0.0362179262 |
| GSE48662 | Up | 0.0251521007 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-122-5p | MIMAT0000421 | MIRT023361 | Microarray | Functional MTI (Weak) | 17612493 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
