HCSGD entry for TSC22D3
1. General information
| Official gene symbol | TSC22D3 |
|---|---|
| Entrez ID | 1831 |
| Gene full name | TSC22 domain family, member 3 |
| Other gene symbols | DIP DSIPI GILZ TSC-22R hDIP |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0000122 | Negative regulation of transcription from RNA polymerase II promoter | IEA | biological_process |
| GO:0003700 | Sequence-specific DNA binding transcription factor activity | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0005737 | Cytoplasm | IEA | cellular_component |
| GO:0005829 | Cytosol | TAS | cellular_component |
| GO:0006355 | Regulation of transcription, DNA-templated | TAS | biological_process |
| GO:0006970 | Response to osmotic stress | IEA | biological_process |
| GO:0007589 | Body fluid secretion | IEA | biological_process |
| GO:0034220 | Ion transmembrane transport | TAS | biological_process |
| GO:0043426 | MRF binding | IEA | molecular_function |
| GO:0048642 | Negative regulation of skeletal muscle tissue development | IEA | biological_process |
| GO:0055085 | Transmembrane transport | TAS | biological_process |
| GO:0070236 | Negative regulation of activation-induced cell death of T cells | IEA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.3717555450 | 0.1898925079 | 0.9999902473 | 0.8447119655 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3708487297 |
| GSE13712_SHEAR | Up | 0.1440915598 |
| GSE13712_STATIC | Down | -0.4831801337 |
| GSE19018 | Up | 0.2352327244 |
| GSE19899_A1 | Down | -0.0208065013 |
| GSE19899_A2 | Down | -0.0376269957 |
| PubMed_21979375_A1 | Down | -0.1555715696 |
| PubMed_21979375_A2 | Down | -0.2467264764 |
| GSE35957 | Up | 0.2447874200 |
| GSE36640 | Up | 0.6436471197 |
| GSE54402 | Down | -0.2229098143 |
| GSE9593 | Up | 0.7973897440 |
| GSE43922 | Down | -0.0717617073 |
| GSE24585 | Up | 0.1866683536 |
| GSE37065 | Down | -0.2353975314 |
| GSE28863_A1 | Down | -0.0154507367 |
| GSE28863_A2 | Down | -0.4110307113 |
| GSE28863_A3 | Up | 0.0401442197 |
| GSE28863_A4 | Up | 0.0403887863 |
| GSE48662 | Up | 0.5014681954 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-18a-5p | MIMAT0000072 | MIRT004547 | qRT-PCR | Functional MTI (Weak) | 19131573 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT004548 | qRT-PCR | Functional MTI (Weak) | 19131573 |
| hsa-miR-182-5p | MIMAT0000259 | MIRT005359 | Luciferase reporter assay//qRT-PCR | Functional MTI | 20656788 |
| hsa-miR-335-5p | MIMAT0000765 | MIRT018941 | Microarray | Functional MTI (Weak) | 18185580 |
| hsa-miR-1229-3p | MIMAT0005584 | MIRT036322 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-877-3p | MIMAT0004950 | MIRT037102 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-744-5p | MIMAT0004945 | MIRT037722 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-484 | MIMAT0002174 | MIRT042293 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-19b-3p | MIMAT0000074 | MIRT050637 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
