HCSGD entry for AFM
1. General information
| Official gene symbol | AFM |
|---|---|
| Entrez ID | 173 |
| Gene full name | afamin |
| Other gene symbols | ALB2 ALBA ALF |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005576 | Extracellular region | TAS | cellular_component |
| GO:0005615 | Extracellular space | IDA | cellular_component |
| GO:0008431 | Vitamin E binding | IDA | molecular_function |
| GO:0051180 | Vitamin transport | IDA | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8091076593 | 0.5282046389 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2412513268 |
| GSE13712_SHEAR | Down | -0.2071470174 |
| GSE13712_STATIC | Down | -0.2622517386 |
| GSE19018 | Down | -0.0671396084 |
| GSE19899_A1 | Up | 0.1434500346 |
| GSE19899_A2 | Up | 0.0511204382 |
| PubMed_21979375_A1 | Down | -0.0197810729 |
| PubMed_21979375_A2 | Down | -0.1730481541 |
| GSE35957 | Up | 0.2447291826 |
| GSE36640 | Down | -0.1761928768 |
| GSE54402 | Up | 0.1483416792 |
| GSE9593 | Down | -0.2368482350 |
| GSE43922 | Up | 0.0041648460 |
| GSE24585 | Up | 0.3404072971 |
| GSE37065 | Up | 0.0273492022 |
| GSE28863_A1 | Down | -0.0196422236 |
| GSE28863_A2 | Up | 0.0707996444 |
| GSE28863_A3 | Up | 0.1027113712 |
| GSE28863_A4 | Up | 0.0640102590 |
| GSE48662 | Up | 0.0125908617 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
No target information from mirTarBase
- mirTarBase
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: 3 abstracts the gene occurs.
PubMed ID of the article | Sentenece the gene occurs |
|---|---|
| 26018339 | Multiparametric AFM reveals turgor-responsive net-like peptidoglycan architecture in live streptococci |
| 26018339 | Here using high-resolution multiparametric atomic force microscopy (AFM), we studied how the structure and elasticity of PG change when subjected to increasing turgor pressure in live Group B Streptococcus |
| 23478225 | Finally, the micromechanical properties determined by atomic force microscopy (AFM) indentation varied in the range from 6 GPa (PEU) to 13 GPa (PEI) |
| 23453395 | In this study we used force spectroscopy by AFM, confocal microscopy and flow cytometry to investigate the difference between single non-confluent and confluent (in monolayer) Vero cells |
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