HCSGD entry for SPTSSA
1. General information
| Official gene symbol | SPTSSA |
|---|---|
| Entrez ID | 171546 |
| Gene full name | serine palmitoyltransferase, small subunit A |
| Other gene symbols | C14orf147 SSSPTA |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004758 | Serine C-palmitoyltransferase activity | IDA | molecular_function |
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
| GO:0017059 | Serine C-palmitoyltransferase complex | IDA | cellular_component |
| GO:0030148 | Sphingolipid biosynthetic process | TAS | biological_process |
Entries Per Page
Displaying Page of
4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.9390644504 | 0.0483585882 | 0.9999902473 | 0.4116433560 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.0905821804 |
| GSE13712_SHEAR | Down | -0.1652290188 |
| GSE13712_STATIC | Down | -0.1406224658 |
| GSE19018 | Up | 0.2994283675 |
| GSE19899_A1 | Down | -0.1969103049 |
| GSE19899_A2 | Down | -0.3854689797 |
| PubMed_21979375_A1 | Down | -0.2194219603 |
| PubMed_21979375_A2 | Down | -1.0040703640 |
| GSE35957 | Down | -0.4005937245 |
| GSE36640 | Down | -0.5265442399 |
| GSE54402 | Down | -0.2978079120 |
| GSE9593 | Down | -0.8255491442 |
| GSE43922 | Down | -0.0779492276 |
| GSE24585 | Down | -0.0702314700 |
| GSE37065 | Up | 0.1053362370 |
| GSE28863_A1 | Up | 0.0554579674 |
| GSE28863_A2 | Up | 0.2309736985 |
| GSE28863_A3 | Up | 0.0794406502 |
| GSE28863_A4 | Up | 0.0358091221 |
| GSE48662 | Down | -0.0759613846 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-221-3p | MIMAT0000278 | MIRT024140 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-454-3p | MIMAT0003885 | MIRT039222 | CLASH | Functional MTI (Weak) | 23622248 |
Entries Per Page
Displaying Page of
- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
