HCSGD entry for PKD1L1

1. General information

Official gene symbolPKD1L1
Entrez ID168507
Gene full namepolycystic kidney disease 1 like 1
Other gene symbolsPRO19563
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0003127Detection of nodal flowISSbiological_process
GO:0003674Molecular_functionNDmolecular_function
GO:0005262Calcium channel activityIBAmolecular_function
GO:0005929CiliumISScellular_component
GO:0006810TransportIBAbiological_process
GO:0006812Cation transportIBAbiological_process
GO:0016020MembraneTAScellular_component
GO:0016021Integral component of membraneIEAcellular_component
GO:0016337Cell-cell adhesionNASbiological_process
GO:0030001Metal ion transportIBAbiological_process
GO:0034220Ion transmembrane transportIBAbiological_process
GO:0050982Detection of mechanical stimulusIBAbiological_process
GO:0055085Transmembrane transportIBAbiological_process
GO:0070588Calcium ion transmembrane transportIBAbiological_process
GO:0070986Left/right axis specificationISSbiological_process
GO:0072511Divalent inorganic cation transportIBAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.63773913610.90237824170.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0418453707
GSE13712_SHEARUp0.1233872857
GSE13712_STATICUp0.0681843705
GSE19018Up0.2656537037
GSE19899_A1Up0.1010719757
GSE19899_A2Up0.2111742977
PubMed_21979375_A1Down-0.0538072216
PubMed_21979375_A2Down-0.1189491312
GSE35957Down-0.0144293131
GSE36640Up0.0390153554
GSE54402Down-0.0464249421
GSE9593Down-0.0713187299
GSE43922Up0.0228050446
GSE24585Up0.0062050834
GSE37065Up0.0341820540
GSE28863_A1Down-0.0864131481
GSE28863_A2Up0.0552640005
GSE28863_A3Up0.1187473254
GSE28863_A4Up0.0526322653
GSE48662Up0.0251465402

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-1MIMAT0000416MIRT023957MicroarrayFunctional MTI (Weak)18668037
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    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.