HCSGD entry for BBS12
1. General information
| Official gene symbol | BBS12 |
|---|---|
| Entrez ID | 166379 |
| Gene full name | Bardet-Biedl syndrome 12 |
| Other gene symbols | C4orf24 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005515 | Protein binding | IPI | molecular_function |
| GO:0005524 | ATP binding | IEA | molecular_function |
| GO:0005929 | Cilium | IEA | cellular_component |
| GO:0044267 | Cellular protein metabolic process | IEA | biological_process |
| GO:0045599 | Negative regulation of fat cell differentiation | IMP | biological_process |
| GO:0051131 | Chaperone-mediated protein complex assembly | IMP | biological_process |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0925891645 | 0.2081283918 | 0.6389619895 | 0.8832194973 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.7314811511 |
| GSE13712_SHEAR | Down | -0.5324596291 |
| GSE13712_STATIC | Down | -0.6184030157 |
| GSE19018 | Up | 0.0855570727 |
| GSE19899_A1 | Up | 0.1905572998 |
| GSE19899_A2 | Up | 0.0498867449 |
| PubMed_21979375_A1 | Up | 0.5606436816 |
| PubMed_21979375_A2 | Up | 0.1869728975 |
| GSE35957 | Down | -0.9745368610 |
| GSE36640 | Up | 1.0616075901 |
| GSE54402 | Up | 0.5186409792 |
| GSE9593 | Up | 0.0939782030 |
| GSE43922 | Up | 0.0779984485 |
| GSE24585 | Up | 0.4673962191 |
| GSE37065 | Up | 0.1319792558 |
| GSE28863_A1 | Down | -0.1503123762 |
| GSE28863_A2 | Down | -0.4257151823 |
| GSE28863_A3 | Down | -0.1341523683 |
| GSE28863_A4 | Down | -0.1813347914 |
| GSE48662 | Down | -0.2576460828 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-23b-3p | MIMAT0000418 | MIRT046329 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
