HCSGD entry for SDE2

1. General information

Official gene symbolSDE2
Entrez ID163859
Gene full nameSDE2 telomere maintenance homolog (S. pombe)
Other gene symbolsC1orf55 RP4-671D7.1 dJ671D7.1
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

Not in the Gene Ontology

4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.01066221270.84481529200.26228046731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.2057997316
GSE13712_SHEARUp0.0533279303
GSE13712_STATICUp0.1636430118
GSE19018Down-0.3106481260
GSE19899_A1Up0.5798891175
GSE19899_A2Up1.2045566127
PubMed_21979375_A1Up1.7317912308
PubMed_21979375_A2Up1.7039534228
GSE35957Up0.1076217342
GSE36640Down-0.0724526692
GSE54402Up0.7829861556
GSE9593Up0.2800074656
GSE43922Up0.7971644274
GSE24585Up0.2069376869
GSE37065Up0.1492219710
GSE28863_A1Down-0.5328012306
GSE28863_A2Up0.0734230050
GSE28863_A3Down-0.1522727786
GSE28863_A4Down-0.0832163527
GSE48662Down-0.2952757863

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase

MiRNA_name

mirBase ID

miRTarBase ID

Experiment

Support type

References (Pubmed ID)

hsa-miR-615-3pMIMAT0003283MIRT039854CLASHFunctional MTI (Weak)23622248
hsa-miR-30c-5pMIMAT0000244MIRT047992CLASHFunctional MTI (Weak)23622248
Entries Per Page
Displaying Page of
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.