HCSGD entry for PHOSPHO1


1. General information

Official gene symbolPHOSPHO1
Entrez ID162466
Gene full namephosphatase, orphan 1
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0001958Endochondral ossificationIEAbiological_process
GO:0005829CytosolTAScellular_component
GO:0006644Phospholipid metabolic processTASbiological_process
GO:0006646Phosphatidylethanolamine biosynthetic processTASbiological_process
GO:0006656Phosphatidylcholine biosynthetic processTASbiological_process
GO:0016311DephosphorylationEXPbiological_process
GO:0016462Pyrophosphatase activityIDAmolecular_function
GO:0016791Phosphatase activityIEAmolecular_function
GO:0030500Regulation of bone mineralizationIEAbiological_process
GO:0035630Bone mineralization involved in bone maturationIEAbiological_process
GO:0044281Small molecule metabolic processTASbiological_process
GO:0046474Glycerophospholipid biosynthetic processTASbiological_process
GO:0046872Metal ion bindingIEAmolecular_function
GO:0052731Phosphocholine phosphatase activityEXPmolecular_function
GO:0052732Phosphoethanolamine phosphatase activityEXPmolecular_function
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.19150078260.93456898670.84956886901.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.0111547110
GSE13712_SHEARDown-0.0024801458
GSE13712_STATICUp0.1086148901
GSE19018Up0.1454542068
GSE19899_A1Down-0.0159872125
GSE19899_A2Down-0.1128001826
PubMed_21979375_A1Up0.0090780459
PubMed_21979375_A2Up0.0415027479
GSE35957Up0.2992944006
GSE36640Up0.0956321032
GSE54402Down-0.0334118550
GSE9593Up0.0986704972
GSE43922Up0.1121693369
GSE24585Up0.0327534223
GSE37065Up0.1534791941
GSE28863_A1Down-0.1161635082
GSE28863_A2Down-0.0841002695
GSE28863_A3Up0.3866333669
GSE28863_A4Up0.2650654743
GSE48662Up0.4280154864

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Name

Drug

Accession number

CholineDB00122 NUTR00020

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.