HCSGD entry for PPTC7
1. General information
| Official gene symbol | PPTC7 |
|---|---|
| Entrez ID | 160760 |
| Gene full name | PTC7 protein phosphatase homolog (S. cerevisiae) |
| Other gene symbols | TA-PP2C TAPP2C |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0004721 | Phosphoprotein phosphatase activity | IEA | molecular_function |
| GO:0005739 | Mitochondrion | IEA | cellular_component |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0611765586 | 0.9300380647 | 0.5354932491 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.3050587858 |
| GSE13712_SHEAR | Up | 0.3772789471 |
| GSE13712_STATIC | Up | 0.0189817533 |
| GSE19018 | Down | -0.2555867617 |
| GSE19899_A1 | Up | 0.1133167889 |
| GSE19899_A2 | Up | 0.6019557668 |
| PubMed_21979375_A1 | Up | 0.5894903639 |
| PubMed_21979375_A2 | Up | 0.3743168483 |
| GSE35957 | Down | -0.1630073182 |
| GSE36640 | Up | 0.0414543900 |
| GSE54402 | Up | 0.3440576146 |
| GSE9593 | Up | 0.1854417488 |
| GSE43922 | Up | 0.4906979690 |
| GSE24585 | Up | 0.0100666448 |
| GSE37065 | Up | 0.4166147312 |
| GSE28863_A1 | Down | -0.2459922000 |
| GSE28863_A2 | Up | 0.1369454435 |
| GSE28863_A3 | Down | -0.1826267067 |
| GSE28863_A4 | Down | -0.0315683781 |
| GSE48662 | Up | 0.0923220322 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-744-5p | MIMAT0004945 | MIRT016087 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT030006 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-18a-3p | MIMAT0002891 | MIRT040910 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-15b-5p | MIMAT0000417 | MIRT046429 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-93-5p | MIMAT0000093 | MIRT048826 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
