HCSGD entry for SBSPON

1. General information

Official gene symbolSBSPON
Entrez ID157869
Gene full namesomatomedin B and thrombospondin, type 1 domain containing
Other gene symbolsC8orf84 RPESP
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

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This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0005044Scavenger receptor activityIEAmolecular_function
GO:0005578Proteinaceous extracellular matrixIEAcellular_component
GO:0006955Immune responseIEAbiological_process
GO:0030247Polysaccharide bindingIEAmolecular_function
GO:0031012Extracellular matrixIDAcellular_component
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.54588016030.47262134800.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Up0.0322740961
GSE13712_SHEARDown-0.1336182415
GSE13712_STATICDown-0.0719676198
GSE19018Up0.0975200697
GSE19899_A1Up0.0433304798
GSE19899_A2Down-0.1229594596
PubMed_21979375_A1Up0.0891817763
PubMed_21979375_A2Down-0.0821406180
GSE35957Up0.4756208651
GSE36640Up0.0105739814
GSE54402Up0.0557201109
GSE9593Up0.0254524212
GSE43922Up0.0287012054
GSE24585Up0.1915662888
GSE37065Up0.0320884588
GSE28863_A1Down-0.4524204398
GSE28863_A2Down-0.1487090433
GSE28863_A3Up0.1993696735
GSE28863_A4Up0.0607636831
GSE48662Up0.0296742195

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.