HCSGD entry for CLVS1
1. General information
| Official gene symbol | CLVS1 |
|---|---|
| Entrez ID | 157807 |
| Gene full name | clavesin 1 |
| Other gene symbols | CRALBPL RLBP1L1 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005215 | Transporter activity | IEA | molecular_function |
| GO:0005768 | Endosome | IDA | cellular_component |
| GO:0005794 | Golgi apparatus | IEA | cellular_component |
| GO:0005802 | Trans-Golgi network | ISS | cellular_component |
| GO:0007040 | Lysosome organization | ISS | biological_process |
| GO:0030136 | Clathrin-coated vesicle | ISS | cellular_component |
| GO:0031901 | Early endosome membrane | IEA | cellular_component |
| GO:0080025 | Phosphatidylinositol-3,5-bisphosphate binding | IDA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.2613893127 | 0.9678031572 | 0.9548552442 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.1502109862 |
| GSE13712_SHEAR | Up | 0.0149990257 |
| GSE13712_STATIC | Up | 0.1785579965 |
| GSE19018 | Up | 0.1201032192 |
| GSE19899_A1 | Up | 0.0860294183 |
| GSE19899_A2 | Up | 0.1196048664 |
| PubMed_21979375_A1 | Up | 0.2269934111 |
| PubMed_21979375_A2 | Up | 0.0378519321 |
| GSE35957 | Up | 0.2873398359 |
| GSE36640 | Up | 0.1094273349 |
| GSE54402 | Up | 0.0324825605 |
| GSE9593 | Down | -0.1273773061 |
| GSE43922 | Up | 0.0475687670 |
| GSE24585 | Up | 0.1321064500 |
| GSE37065 | Up | 0.0586421713 |
| GSE28863_A1 | Up | 0.0644842550 |
| GSE28863_A2 | Up | 0.1109197758 |
| GSE28863_A3 | Up | 0.0653356428 |
| GSE28863_A4 | Up | 0.1030116113 |
| GSE48662 | Up | 0.0519176333 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-215-5p | MIMAT0000272 | MIRT024833 | Microarray | Functional MTI (Weak) | 19074876 |
| hsa-miR-192-5p | MIMAT0000222 | MIRT026360 | Microarray | Functional MTI (Weak) | 19074876 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
