HCSGD entry for SHISA4
1. General information
| Official gene symbol | SHISA4 |
|---|---|
| Entrez ID | 149345 |
| Gene full name | shisa homolog 4 (Xenopus laevis) |
| Other gene symbols | C1orf40 TMEM58 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.8867994187 | 0.0110983701 | 0.9999902473 | 0.2083282965 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.2459467532 |
| GSE13712_SHEAR | Down | -0.3558894113 |
| GSE13712_STATIC | Down | -0.7610215671 |
| GSE19018 | Down | -0.0505133358 |
| GSE19899_A1 | Down | -0.5277520329 |
| GSE19899_A2 | Down | -0.1309968686 |
| PubMed_21979375_A1 | Down | -0.3046536600 |
| PubMed_21979375_A2 | Down | -0.7405385353 |
| GSE35957 | Up | 0.3486753810 |
| GSE36640 | Up | 0.6410159751 |
| GSE54402 | Down | -0.6801744588 |
| GSE9593 | Up | 0.6550044961 |
| GSE43922 | Down | -0.5898391579 |
| GSE24585 | Up | 0.1587638700 |
| GSE37065 | Down | -0.0351073638 |
| GSE28863_A1 | Down | -0.4963055037 |
| GSE28863_A2 | Down | -0.3831798856 |
| GSE28863_A3 | Down | -0.2863431571 |
| GSE28863_A4 | Down | -0.2794500343 |
| GSE48662 | Up | 0.4658206516 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT018206 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
