HCSGD entry for ZNF563
1. General information
| Official gene symbol | ZNF563 |
|---|---|
| Entrez ID | 147837 |
| Gene full name | zinc finger protein 563 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.6211986513 | 0.5638212454 | 0.9999902473 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Up | 0.0281752247 |
| GSE13712_SHEAR | Down | -0.2498102561 |
| GSE13712_STATIC | Down | -0.1909565754 |
| GSE19018 | Up | 0.0281563540 |
| GSE19899_A1 | Up | 0.0807736517 |
| GSE19899_A2 | Down | -0.0662005209 |
| PubMed_21979375_A1 | Down | -0.0853641865 |
| PubMed_21979375_A2 | Up | 0.1993833711 |
| GSE35957 | Up | 0.0964017439 |
| GSE36640 | Down | -0.0125288642 |
| GSE54402 | Up | 0.0585242492 |
| GSE9593 | Down | -0.0427476908 |
| GSE43922 | Up | 0.0140303670 |
| GSE24585 | Up | 0.5922291067 |
| GSE37065 | Up | 0.1558526207 |
| GSE28863_A1 | Down | -0.2973094674 |
| GSE28863_A2 | Down | -0.1566430185 |
| GSE28863_A3 | Down | -0.0846947201 |
| GSE28863_A4 | Down | -0.0505088782 |
| GSE48662 | Up | 0.0943541184 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-335-5p | MIMAT0000765 | MIRT019200 | Microarray | Functional MTI (Weak) | 18185580 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
