HCSGD entry for ZNF548
1. General information
| Official gene symbol | ZNF548 |
|---|---|
| Entrez ID | 147694 |
| Gene full name | zinc finger protein 548 |
| Other gene symbols | |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0003676 | Nucleic acid binding | IEA | molecular_function |
| GO:0003677 | DNA binding | IEA | molecular_function |
| GO:0005622 | Intracellular | IEA | cellular_component |
| GO:0005634 | Nucleus | IEA | cellular_component |
| GO:0006351 | Transcription, DNA-templated | IEA | biological_process |
| GO:0006355 | Regulation of transcription, DNA-templated | IEA | biological_process |
| GO:0046872 | Metal ion binding | IEA | molecular_function |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.7932599027 | 0.1171024885 | 0.9999902473 | 0.6567770296 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3106463229 |
| GSE13712_SHEAR | Down | -0.0461511254 |
| GSE13712_STATIC | Up | 0.0171490878 |
| GSE19018 | Down | -0.3789155779 |
| GSE19899_A1 | Down | -0.0603759151 |
| GSE19899_A2 | Down | -0.6345349282 |
| PubMed_21979375_A1 | Down | -0.8198098948 |
| PubMed_21979375_A2 | Down | -0.1410384278 |
| GSE35957 | Down | -0.0043221515 |
| GSE36640 | Down | -0.0824842449 |
| GSE54402 | Down | -0.5972460745 |
| GSE9593 | Up | 0.0139541243 |
| GSE43922 | Up | 0.0783937773 |
| GSE24585 | Down | -0.0658915891 |
| GSE37065 | Down | -0.0150463027 |
| GSE28863_A1 | Up | 0.7438746335 |
| GSE28863_A2 | Up | 0.3071513037 |
| GSE28863_A3 | Down | -0.0486297988 |
| GSE28863_A4 | Up | 0.1650823757 |
| GSE48662 | Down | -0.1034709655 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-124-3p | MIMAT0000422 | MIRT022771 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-26b-5p | MIMAT0000083 | MIRT029691 | Microarray | Functional MTI (Weak) | 19088304 |
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- mirRecord
No target information from mirRecord
- mirRecord
6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
