HCSGD entry for CMTM4
1. General information
| Official gene symbol | CMTM4 |
|---|---|
| Entrez ID | 146223 |
| Gene full name | CKLF-like MARVEL transmembrane domain containing 4 |
| Other gene symbols | CKLFSF4 |
| Links to Entrez Gene | Links to Entrez Gene |
2. Neighbors in the network
This gene isn't in PPI subnetwork.
3. Gene ontology annotation
GO ID | GO term | Evidence | Category |
|---|---|---|---|
| GO:0005125 | Cytokine activity | IEA | molecular_function |
| GO:0005615 | Extracellular space | IEA | cellular_component |
| GO:0006935 | Chemotaxis | IEA | biological_process |
| GO:0016021 | Integral component of membrane | IEA | cellular_component |
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4. Expression levels in datasets
- Meta-analysis result
| p-value up | p-value down | FDR up | FDR down |
|---|---|---|---|
| 0.0440080810 | 0.6116544470 | 0.4670712500 | 1.0000000000 |
- Individual experiment result
( "-" represent NA in the specific microarray platform )
( "-" represent NA in the specific microarray platform )
| Data source | Up or down | Log fold change |
|---|---|---|
| GSE11954 | Down | -0.3593898683 |
| GSE13712_SHEAR | Down | -0.3462109246 |
| GSE13712_STATIC | Up | 0.0203919365 |
| GSE19018 | Up | 0.1555264726 |
| GSE19899_A1 | Down | -0.0134231461 |
| GSE19899_A2 | Up | 0.6304381963 |
| PubMed_21979375_A1 | Down | -0.1437587185 |
| PubMed_21979375_A2 | Up | 0.2957137811 |
| GSE35957 | Up | 0.6266774110 |
| GSE36640 | Up | 0.7294552943 |
| GSE54402 | Up | 0.2005134395 |
| GSE9593 | Up | 0.3819558770 |
| GSE43922 | Down | -0.0413874886 |
| GSE24585 | Down | -0.3085746805 |
| GSE37065 | Down | -0.2205902745 |
| GSE28863_A1 | Up | 0.5845016862 |
| GSE28863_A2 | Up | 1.3460043560 |
| GSE28863_A3 | Down | -0.1307890420 |
| GSE28863_A4 | Down | -0.0679876790 |
| GSE48662 | Up | 0.6313171918 |
5. Regulation relationships with compounds/drugs/microRNAs
- Compounds
Not regulated by compounds
- Drugs
Not regulated by drugs
- MicroRNAs
- mirTarBase
- mirTarBase
MiRNA_name | mirBase ID | miRTarBase ID | Experiment | Support type | References (Pubmed ID) |
|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | MIRT003843 | Microarray | Functional MTI (Weak) | 15685193 |
| hsa-miR-375 | MIMAT0000728 | MIRT019833 | Microarray | Functional MTI (Weak) | 20215506 |
| hsa-miR-186-5p | MIMAT0000456 | MIRT021171 | Sequencing | Functional MTI (Weak) | 20371350 |
| hsa-miR-124-3p | MIMAT0000422 | MIRT022566 | Microarray | Functional MTI (Weak) | 18668037 |
| hsa-miR-24-3p | MIMAT0000080 | MIRT030538 | Microarray | Functional MTI (Weak) | 20371350 |
| hsa-miR-503-5p | MIMAT0002874 | MIRT041117 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-125b-5p | MIMAT0000423 | MIRT045989 | CLASH | Functional MTI (Weak) | 23622248 |
| hsa-miR-23b-3p | MIMAT0000418 | MIRT046380 | CLASH | Functional MTI (Weak) | 23622248 |
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- mirRecord
- mirRecord
MicroRNA name | mirBase ID | Target site number | MiRNA mature ID | Test method inter | MiRNA regulation site | Reporter target site | Pubmed ID |
|---|---|---|---|---|---|---|---|
| hsa-miR-373-3p | MIMAT0000726 | NA | hsa-miR-373 | 15685193 |
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6. Text-mining results about the gene
Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.
