HCSGD entry for LYSMD4

1. General information

Official gene symbolLYSMD4
Entrez ID145748
Gene full nameLysM, putative peptidoglycan-binding, domain containing 4
Other gene symbols
Links to Entrez GeneLinks to Entrez Gene

2. Neighbors in the network

color bar
This gene isn't in PPI subnetwork.

3. Gene ontology annotation

GO ID

GO term

Evidence

Category

GO:0016021Integral component of membraneIEAcellular_component
GO:0016998Cell wall macromolecule catabolic processIEAbiological_process
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4. Expression levels in datasets

  • Meta-analysis result

p-value upp-value downFDR upFDR down
0.49641746890.36152184570.99999024731.0000000000

  • Individual experiment result
    ( "-" represent NA in the specific microarray platform )

Data sourceUp or downLog fold change
GSE11954Down-0.1042044239
GSE13712_SHEARUp0.7201750504
GSE13712_STATICUp0.1276547150
GSE19018Up0.1926952416
GSE19899_A1Up0.0407347946
GSE19899_A2Down-0.3304124493
PubMed_21979375_A1Down-1.5081396763
PubMed_21979375_A2Down-0.1043149214
GSE35957Up0.3349793316
GSE36640Up0.3923740841
GSE54402Down-0.3997359870
GSE9593Up0.4655855389
GSE43922Up0.0096562885
GSE24585Up0.0283568583
GSE37065Down-0.1524856716
GSE28863_A1Down-0.1285422446
GSE28863_A2Up0.0086463480
GSE28863_A3Up0.0224298141
GSE28863_A4Up0.0023568062
GSE48662Up0.0417005156

5. Regulation relationships with compounds/drugs/microRNAs

  • Compounds

Not regulated by compounds

  • Drugs

Not regulated by drugs

  • MicroRNAs

    • mirTarBase
No target information from mirTarBase
    • mirRecord
No target information from mirRecord

6. Text-mining results about the gene

Gene occurances in abstracts of cellular senescence-associated articles: This gene isn't in text-mining gene-sentence result.